RNA sequencing: From quality control to pathway analysis

Walid Gharib

21, 22 Jan 2019













Schedule



Day1

hour topic
9:15 – 10:30 Introduction to RNA-sequencing
10:30 – 11:00 Coffee break
11:00 – 12:30 Sequencing archives
12:30 – 13:30 Lunch break
13:30 – 15:00 Quality control and filtering
15:00 – 15:30 Coffee break
15:30 – 17:00 Alignment and pseudo alignment


Day2

hour topic
9:15 – 10:30 RNA seq abundance estimates
10:30 – 11:00 Coffee break
11:00 – 12:30 Differential expression
12:30 – 13:30 Lunch break
13:30 – 15:00 GO and pathway analysis







Tutorial trainers: Walid Gharib and Irene Keller




Feedback

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Practical info

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